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Roadmap Epigenome Project Protocols Database
Methylome Analysis
DNaseI
ChIP-Seq
RNA Analysis
General Protocols
Data
Standards
REMC Standards and Guidelines for ChIP-seq
v1.0
REMC Standards and Guidelines for RNA-sequencing
DRAFT v3.0
Standards and Guidelines for Whole Genome Shotgun Bisulfite Sequencing
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Experimental
Protocols
5xMRE-seq library construction protocol v5
November 2010 -- Costello Lab
ChIP Library Preparation Protocol
Ren Lab
ChIP Protocol for Full REMC (6 marks)
Broad
ChIP-Seq Protocol: Cells
UW Stam Lab
ChIP-Seq Protocol: Tissue samples
UW Stam Lab
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ChIP-Seq protocols
REMC Standards and Guidelines for ChIP-seq
v1.0
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ChIP Library Preparation Protocol
Ren Lab
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ChIP Protocol for Full REMC (6 marks)
Broad
Download this protocol here
ChIP-Seq Protocol: Cells
UW Stam Lab
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ChIP-Seq Protocol: Tissue samples
UW Stam Lab
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Chromatin Immunoprecipitation (ChIP)
BC
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Chromatin Immunoprecipitation Protocol
Ren Lab
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Hi-C Protocol
Ren Lab
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Isolation of modified histones from chromatin
Ren Lab
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Peptide Dot Blot Antibody Specificity Screening
Ren Lab
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Prepare Chip-Seq DNA Library for Solexa
Ren Lab
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REMC ChIP and Library Construction Protocol
Farnham Lab
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Tissue Fixation and Sonication Protocol
Ren Lab
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