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Methylome Analysis
DNaseI
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Standards
REMC Standards and Guidelines for ChIP-seq
v1.0
REMC Standards and Guidelines for RNA-sequencing
DRAFT v3.0
Standards and Guidelines for Whole Genome Shotgun Bisulfite Sequencing
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Experimental
Protocols
5xMRE-seq library construction protocol v5
November 2010 -- Costello Lab
ChIP Library Preparation Protocol
Ren Lab
ChIP Protocol for Full REMC (6 marks)
Broad
ChIP-Seq Protocol: Cells
UW Stam Lab
ChIP-Seq Protocol: Tissue samples
UW Stam Lab
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Methylome Analysis protocols
Standards and Guidelines for Whole Genome Shotgun Bisulfite Sequencing
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5xMRE-seq library construction protocol v5
November 2010 -- Costello Lab
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MeDIP-seq library construction protocol v2
June 2010 -- Costello Lab
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MethylC-seq library preparation protocol
Ecker Lab
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Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling
Broad Institute
Triple-MRE-seq library construction protocol v5
March 2011 -- Costello Lab
Download this protocol here